{"id":82502,"date":"2025-06-05T11:42:02","date_gmt":"2025-06-05T09:42:02","guid":{"rendered":"https:\/\/cegat.com\/in-depth-characterization-of-vaccine-induced-neoantigen-specific-t-cells-in-patients-with-idh1-mutant-glioma-undergoing-personalized-peptide-vaccination\/"},"modified":"2025-12-15T13:32:35","modified_gmt":"2025-12-15T12:32:35","slug":"in-depth-characterization-of-vaccine-induced-neoantigen-specific-t-cells-in-patients-with-idh1-mutant-glioma-undergoing-personalized-peptide-vaccination","status":"publish","type":"post","link":"https:\/\/cegat.com\/de\/in-depth-characterization-of-vaccine-induced-neoantigen-specific-t-cells-in-patients-with-idh1-mutant-glioma-undergoing-personalized-peptide-vaccination\/","title":{"rendered":"In-depth characterization of vaccine-induced neoantigen-specific T cells in patients with IDH1-mutant glioma undergoing personalized peptide vaccination"},"content":{"rendered":"<p><div class=\"fusion-fullwidth fullwidth-box fusion-builder-row-1 fusion-flex-container has-pattern-background has-mask-background nonhundred-percent-fullwidth non-hundred-percent-height-scrolling\" style=\"--awb-border-radius-top-left:0px;--awb-border-radius-top-right:0px;--awb-border-radius-bottom-right:0px;--awb-border-radius-bottom-left:0px;--awb-flex-wrap:wrap;\" ><div class=\"fusion-builder-row fusion-row fusion-flex-align-items-flex-start fusion-flex-content-wrap\" style=\"max-width:1248px;margin-left: calc(-4% \/ 2 );margin-right: calc(-4% \/ 2 );\"><div class=\"fusion-layout-column fusion_builder_column fusion-builder-column-0 fusion_builder_column_1_1 1_1 fusion-flex-column\" style=\"--awb-bg-size:cover;--awb-width-large:100%;--awb-margin-top-large:0px;--awb-spacing-right-large:1.92%;--awb-margin-bottom-large:20px;--awb-spacing-left-large:1.92%;--awb-width-medium:100%;--awb-order-medium:0;--awb-spacing-right-medium:1.92%;--awb-spacing-left-medium:1.92%;--awb-width-small:100%;--awb-order-small:0;--awb-spacing-right-small:1.92%;--awb-spacing-left-small:1.92%;\"><div class=\"fusion-column-wrapper fusion-column-has-shadow fusion-flex-justify-content-flex-start fusion-content-layout-column\"><div class=\"fusion-text fusion-text-1\" style=\"--awb-content-alignment:justify;--awb-font-size:24px;\"><p>Henning Zelba<sup>1<\/sup>, Borong Shao<sup>1<\/sup>, Armin Rabsteyn<sup>1<\/sup>, Annekathrin Reinhardt<sup>1<\/sup>, Carsten Greve<sup>1<\/sup>, Lisa Oenning<sup>1<\/sup>, Simone Kayser<sup>1<\/sup>, Christina Kyzirakos<sup>1<\/sup>, Pauline Latzer<sup>1<\/sup>, Tabea Riedlinger<sup>1<\/sup>, Oliver Bartsch<sup>1<\/sup>, Julian W\u00fcnsche<sup>2<\/sup>, Johannes Harter<sup>3<\/sup>, Magdalena Feldhahn<sup>3<\/sup>, Yannick Bantel<sup>3<\/sup>, Janina Joh\u00e4nning<sup>3<\/sup>, Jiri K\u00f6dding<sup>3<\/sup>, Dirk Hadaschik<sup>4<\/sup>, Martin Schulze<sup>1<\/sup>, Florian Battke<sup>3<\/sup>, Olga Maksimovic<sup>2<\/sup>, Veit Scheble<sup>2<\/sup>, Alexandra M Miller<sup>5<\/sup>, Michael Castro<sup>6,7<\/sup>, Deborah T Blumenthal<sup>8<\/sup>, Martin Glas<sup>9<\/sup>, David Reardon<sup>10<\/sup>\u00a0and Saskia Biskup<sup>1,2,3,4<\/sup><\/p>\n<\/div><\/div><\/div><\/div><\/div><div class=\"fusion-fullwidth fullwidth-box fusion-builder-row-2 fusion-flex-container has-pattern-background has-mask-background nonhundred-percent-fullwidth non-hundred-percent-height-scrolling\" style=\"--awb-border-radius-top-left:0px;--awb-border-radius-top-right:0px;--awb-border-radius-bottom-right:0px;--awb-border-radius-bottom-left:0px;--awb-padding-top:60px;--awb-padding-bottom:60px;--awb-flex-wrap:wrap;\" ><div class=\"fusion-builder-row fusion-row fusion-flex-align-items-flex-start fusion-flex-content-wrap\" style=\"max-width:1248px;margin-left: calc(-4% \/ 2 );margin-right: calc(-4% \/ 2 );\"><div class=\"fusion-layout-column fusion_builder_column fusion-builder-column-1 fusion_builder_column_1_1 1_1 fusion-flex-column\" style=\"--awb-bg-size:cover;--awb-width-large:100%;--awb-margin-top-large:0px;--awb-spacing-right-large:1.92%;--awb-margin-bottom-large:20px;--awb-spacing-left-large:1.92%;--awb-width-medium:100%;--awb-order-medium:0;--awb-spacing-right-medium:1.92%;--awb-spacing-left-medium:1.92%;--awb-width-small:100%;--awb-order-small:0;--awb-spacing-right-small:1.92%;--awb-spacing-left-small:1.92%;\"><div class=\"fusion-column-wrapper fusion-column-has-shadow fusion-flex-justify-content-flex-start fusion-content-layout-column\"><div class=\"fusion-title title fusion-title-1 fusion-sep-none fusion-title-text fusion-title-size-two\" style=\"--awb-text-color:var(--awb-custom_color_1);--awb-margin-top-small:10px;--awb-margin-right-small:0px;--awb-margin-bottom-small:10px;--awb-margin-left-small:0px;\"><h2 class=\"fusion-title-heading title-heading-left fusion-responsive-typography-calculated\" style=\"margin:0;text-transform:none;--fontSize:36;line-height:var(--awb-typography1-line-height);\">Abstract<\/h2><\/div><\/div><\/div><div class=\"fusion-layout-column fusion_builder_column fusion-builder-column-2 fusion_builder_column_1_1 1_1 fusion-flex-column\" style=\"--awb-bg-size:cover;--awb-width-large:100%;--awb-margin-top-large:0px;--awb-spacing-right-large:1.92%;--awb-margin-bottom-large:20px;--awb-spacing-left-large:1.92%;--awb-width-medium:100%;--awb-order-medium:0;--awb-spacing-right-medium:1.92%;--awb-spacing-left-medium:1.92%;--awb-width-small:100%;--awb-order-small:0;--awb-spacing-right-small:1.92%;--awb-spacing-left-small:1.92%;\"><div class=\"fusion-column-wrapper fusion-column-has-shadow fusion-flex-justify-content-flex-start fusion-content-layout-column\"><div class=\"fusion-text fusion-text-2\" style=\"--awb-content-alignment:justify;\"><p>Isocitrate dehydrogenase (IDH) mutant glioma is a malignant primary brain tumor diagnosed in adults. In recent years, there has been significant progress in understanding the molecular pathogenesis and biology of these tumors. The first targeted IDH-inhibitor was approved by the US Food and Drug Administration in August 2024 for grade 2 gliomas, in light of results of a phase III trial which showed significant advantages in progression-free survival. However, biologic therapy is not curative, and subsequent treatment options offer only limited clinical benefit and often result in long-term toxicities. In addition, targeted treatment options for grade 3 and grade 4 IDH-mutant gliomas are still missing. In this study, we present n=52 patients with glioma (grade 2, 3 and 4) with confirmed IDH1 mutation (mutIDH1) in the newly diagnosed and recurrent setting who, in addition to standard-of-care, received a personalized neoantigen-targeting peptide vaccine. Each tumor was initially analyzed for somatic mutations by whole exome sequencing, and a peptide vaccine containing potential neoepitopes was designed, manufactured and vaccinated. Each vaccine consisted of peptides derived from numerous somatic mutations, including at least one peptide targeting the mutIDH1.<\/p>\n<p>Vaccine immunogenicity was determined by intracellular cytokine staining and simultaneous measurement of four T-cell activation markers (Interferon-\u03b3, Tumor Necrosis Factor, Interleukin-2, CD154) after 12-day in vitro expansion of pre and post vaccination peripheral blood mononuclear cells. Extracellular CD154 staining was used to sort mutIDH1-specific CD4+T cells.<\/p>\n<p>Immunomonitoring revealed that the vaccines were immunogenic and induced mainly CD4 but also CD8 T cell responses. Vaccine-induced immune responses were robust and polyfunctional. Immunogenicity against mutIDH1 was high (89%). We implemented an assay which allowed us to isolate functional antigen-specific CD4+T cells in an HLA-independent manner. Subsequent T cell receptor (TCR) repertoire sequencing revealed that CD4+T cells reacting on mutIDH1 stimulation were polyclonal. Strikingly, we detected two mutIDH1-specific TCR\u03b2 candidate sequences in three different patients. These three patients had the same human leukocyte antigen (HLA) DQA-DQB alleles. The obtained TCR\u03b2 sequences could be tracked in autologous ex-vivo single-cell transcriptomic data. Our results provide a rationale for pursuing vaccination and T cell transfer strategies targeting IDH1. Furthermore, our findings indicate that personalized neoantigen-targeting vaccines might be considered for the treatment of IDH1-mutant gliomas.<\/p>\n<p><strong class=\"sub-title\">Keywords:&nbsp;<\/strong>T cell; T cell Receptor &#8211; TCR; Vaccine.<\/p>\n<\/div><\/div><\/div><\/div><\/div><div class=\"fusion-fullwidth fullwidth-box fusion-builder-row-3 fusion-flex-container has-pattern-background has-mask-background nonhundred-percent-fullwidth non-hundred-percent-height-scrolling\" style=\"--link_hover_color: var(--awb-color6);--awb-border-radius-top-left:0px;--awb-border-radius-top-right:0px;--awb-border-radius-bottom-right:0px;--awb-border-radius-bottom-left:0px;--awb-padding-top:60px;--awb-padding-bottom:60px;--awb-flex-wrap:wrap;\" ><div class=\"fusion-builder-row fusion-row fusion-flex-align-items-flex-start fusion-flex-content-wrap\" style=\"max-width:1248px;margin-left: calc(-4% \/ 2 );margin-right: calc(-4% \/ 2 );\"><div class=\"fusion-layout-column fusion_builder_column fusion-builder-column-3 fusion_builder_column_1_1 1_1 fusion-flex-column\" style=\"--awb-bg-size:cover;--awb-width-large:100%;--awb-margin-top-large:0px;--awb-spacing-right-large:1.92%;--awb-margin-bottom-large:20px;--awb-spacing-left-large:1.92%;--awb-width-medium:100%;--awb-order-medium:0;--awb-spacing-right-medium:1.92%;--awb-spacing-left-medium:1.92%;--awb-width-small:100%;--awb-order-small:0;--awb-spacing-right-small:1.92%;--awb-spacing-left-small:1.92%;\"><div class=\"fusion-column-wrapper fusion-column-has-shadow fusion-flex-justify-content-flex-start fusion-content-layout-column\"><div class=\"fusion-tabs fusion-tabs-1 classic vertical-tabs icon-position-left mobile-mode-carousel\" style=\"--awb-title-border-radius-top-left:0px;--awb-title-border-radius-top-right:0px;--awb-title-border-radius-bottom-right:0px;--awb-title-border-radius-bottom-left:0px;--awb-title-padding-top:10px;--awb-title-padding-right:50px;--awb-title-padding-bottom:10px;--awb-title-padding-left:50px;--awb-alignment:start;--awb-inactive-color:var(--awb-color7);--awb-title-text-color:var(--awb-color5);--awb-title-active-text-color:var(--awb-custom_color_1);--awb-background-color:var(--awb-color5);--awb-border-color:rgba(0,0,0,0.05);--awb-active-border-color:var(--awb-custom_color_1);\"><div class=\"nav\"><ul class=\"nav-tabs\" role=\"tablist\" aria-orientation=\"vertical\"><li class=\"active\" role=\"presentation\"><a class=\"tab-link\" data-toggle=\"tab\" role=\"tab\" aria-controls=\"tab-4cd48a93915399989d9\" aria-selected=\"true\" tabindex=\"0\" id=\"fusion-tab-4cd48a93915399989d9\" href=\"#tab-4cd48a93915399989d9\"><h3 class=\"fusion-tab-heading\">References<\/h3><\/a><\/li><li  role=\"presentation\"><a class=\"tab-link\" data-toggle=\"tab\" role=\"tab\" aria-controls=\"tab-970777e5970a5e16091\" aria-selected=\"false\" tabindex=\"-1\" id=\"fusion-tab-970777e5970a5e16091\" href=\"#tab-970777e5970a5e16091\"><h3 class=\"fusion-tab-heading\">Authors<\/h3><\/a><\/li><\/ul><\/div><div class=\"tab-content\"><div class=\"tab-pane fade fusion-clearfix in active\" role=\"tabpanel\" tabindex=\"0\" aria-labelledby=\"fusion-tab-4cd48a93915399989d9\" id=\"tab-4cd48a93915399989d9\"><a href=\"https:\/\/pubmed.ncbi.nlm.nih.gov\/40480654\/\" target=\"_blank\" rel=\"noopener\">View this paper on NCBI<\/a><br \/>\n<a href=\"https:\/\/cegat.com\/de\/research-pharma-solutions\/immunology\/t-cell-receptor-sequencing\/\">View  T-Cell Receptor Sequencing<\/a><\/div><div class=\"tab-pane fade fusion-clearfix\" role=\"tabpanel\" tabindex=\"0\" aria-labelledby=\"fusion-tab-970777e5970a5e16091\" id=\"tab-970777e5970a5e16091\">\n<ol>\n<li>Zentrum f\u00fcr Humangenetik T\u00fcbingen, T\u00fcbingen, Germany<\/li>\n<li>MVZ f\u00fcr Diagnostik, Pr\u00e4vention, Onkologie und Gastroenterologie T\u00fcbingen GmbH, T\u00fcbingen, Germany<\/li>\n<li>CeGaT GmbH, Tubingen, Germany<\/li>\n<li>cecava GmbH, T\u00fcbingen, Germany<\/li>\n<li>NYU Langone Health Perlmutter Cancer Center, New York, New York, USA<\/li>\n<li>Cellworks Group Inc, South San Francisco, California, USA<\/li>\n<li>Personalized Cancer Medicine, PLLC, Santa Monica, California, USA<\/li>\n<li>Tel Aviv Sourasky Medical Center, Tel Aviv University, Tel Aviv, Israel<\/li>\n<li>Division of Clinical Neurooncology, University Hospital Essen Department of Neurology, Essen, Germany<\/li>\n<li>Center for Neuro-Oncology, Dana-Farber Cancer Institute, Boston, Massachusetts, USA<\/li>\n<\/ol>\n<\/div><\/div><\/div><\/div><\/div><\/div><\/div><\/p>\n","protected":false},"excerpt":{"rendered":"","protected":false},"author":18,"featured_media":54928,"comment_status":"closed","ping_status":"closed","sticky":false,"template":"","format":"standard","meta":{"footnotes":""},"categories":[278],"tags":[],"class_list":["post-82502","post","type-post","status-publish","format-standard","has-post-thumbnail","hentry","category-publications-de"],"yoast_head":"<!-- This site is optimized with the Yoast SEO plugin v27.1.1 - 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