Richa Sharma 1, Senthil Velan Bhoopalan 2, Robert Meyer 3, Lei Han 4, Swarna Beesetti 5, Nana Liu 5, Priyanka Singh 2, Lance E Palmer 2, Baranda S Hansen 5, Majd Khiami 5, Lise Larcher 6, Matthias Begemann 3, Selim Corbacioglu 7, Lara Heller 8, Marcus Jakob 9, Yan Ju 5, Sushree S Sahoo 5, Nathan Gray 2, Gabriela Gheorghe 2, Miriam Elbracht 3, Claudia Khurana 10, Martin Kirschner 11, Ingo Kurth 3, Miriam Erlacher 12, Tim H Brümmendorf 13, Jean Soulier 14, Shondra M Pruett-Miller 2, Fabian Beier 15, Marcin W Wlodarski 16
Abstract
Bone marrow failure (BMF) syndromes are heterogeneous diseases characterized by impaired hematopoiesis and a risk of evolution to myelodysplastic syndrome (MDS) and leukemia. We report 6 unrelated individuals with variable BMF phenotypes and hypocellular MDS, presenting at a median age of 10 years (range, 4 weeks to 53 years). Genomic analysis revealed germ line heterozygous variants in mouse double minute 4 (MDM4), including 4 null (frameshift, nonsense, and splice site resulting in premature truncation confirmed by RNA sequencing) and 2 missense variants, of which 1 had previously been associated with a familial BMF syndrome. Mechanistically, MDM4 mutations are loss-of-function mutations leading to enhanced p53 activation. We used CRISPR/Cas9 to delete MDM4 in healthy donor hematopoietic stem and progenitor cells (HSPCs). The resulting MDM4-haploinsufficient HSPCs exhibited increased p53 activity, impaired colony-forming capacity, and reduced engraftment potential in immunodeficient mice. Complementation studies revealed both p53-binding and RING-finger domains as necessary for MDM4-mediated hematopoietic regulation. To study variant effects in a confounder-free genetic background, we introduced patient-specific MDM4 variants into induced pluripotent stem cells (iPSCs). MDM4-mutant iPSCs yielded significantly reduced erythroid and myeloid cells and exhibited increased p53 activity, as evidenced by elevated p21 expression, confirming the role of MDM4 in regulating hematopoiesis through p53. Transcriptome analysis of iPSC-derived hematopoietic cells revealed upregulation of the p53 pathway. Importantly, 1 patient with MDS acquired loss-of-function TP53 mutations, suggesting maladaptive somatic rescue. Our findings establish MDM4 deficiency as a TP53-activating syndrome, with features of BMF and variable hematopoietic manifestations. This study also highlights the critical role of the MDM4-p53 axis in maintaining hematopoietic homeostasis.
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- Department of Hematology, St. Jude Children’s Research Hospital, Memphis, TN.
- Cleveland Clinic Research, Cleveland Clinic Foundation, Cleveland, OH.
- Department of Bone Marrow Transplantation and Cellular Therapy, St. Jude Children’s Research Hospital, Memphis, TN.
- Institute for Human Genetics and Genomic Medicine, Medical Faculty, Rheinisch-Westfälische Technische Hochschule, Aachen University, Aachen, Germany.
- Center for Integrated Oncology Aachen Bonn Cologne Düsseldorf, Germany.
- Center for Advanced Genome Engineering, St. Jude Children’s Research Hospital, Memphis, TN.
- Institut de Recherche Saint-Louis, Université Paris Cité, Paris, France.
- INSERM U944/Centre National de la Recherche Scientifique, Unité Mixte de Recherche 7212, Paris, France.
- Saint-Louis Hospital, Hematology Laboratory, Assistance Publique Hôpitaux de Paris, Paris, France.
- Centre de Référence Maladies Rares “Aplasie Médullaire,” Saint-Louis and Robert Debré Hospitals, Paris, France.
- Department of Pediatric Hematology, Oncology and Stem Cell Transplantation, University Hospital of Regensburg, Regensburg, Germany.
- Zentrum für Humangenetik Tübingen, Tübingen, Germany.
- Department of Pathology, St. Jude Children’s Research Hospital, Memphis, TN.
- Klinik für Kinder- und Jugendmedizin, Evangelisches Klinikum Bethel, Bielefeld, Germany.
- Department of Hematology, Oncology, Hemostaseology and Stem Cell Transplantation, Medical Faculty, Rheinisch-Westfälische Technische Hochschule, Aachen University, Aachen, Germany.
- Department of Pediatrics and Adolescent Medicine, University Medical Center Ulm, Ulm, Germany.
